Analyzing Ecological Data

Analyzing Ecological Data
Author: Alain Zuur
Publisher: Springer
Total Pages: 686
Release: 2007-08-29
Genre: Science
ISBN: 0387459723

This book provides a practical introduction to analyzing ecological data using real data sets. The first part gives a largely non-mathematical introduction to data exploration, univariate methods (including GAM and mixed modeling techniques), multivariate analysis, time series analysis, and spatial statistics. The second part provides 17 case studies. The case studies include topics ranging from terrestrial ecology to marine biology and can be used as a template for a reader’s own data analysis. Data from all case studies are available from www.highstat.com. Guidance on software is provided in the book.

Ecological Data

Ecological Data
Author: William K. Michener
Publisher: John Wiley & Sons
Total Pages: 194
Release: 2009-04-01
Genre: Science
ISBN: 1444311395

Ecologists are increasingly tackling difficult issues like global change, loss of biodiversity and sustainability of ecosystem services. These and related topics are enormously challenging, requiring unprecedented multidisciplinary collaboration and rapid synthesis of large amounts of diverse data into information and ultimately knowledge. New sensors, computers, data collection and storage devices and analytical and statistical methods provide a powerful tool kit to support analyses, graphics and visualizations that were unthinkable even a few years ago. New and increased emphasis on accessibility, management, processing and sharing of high-quality, well-maintained and understandable data represents a significant change in how scientists view and treat data. These issues are complex and despite their importance, are typically not addressed in database, ecological and statistical textbooks. This book addresses these issues, providing a much needed resource for those involved in designing and implementing ecological research, as well as students who are entering the environmental sciences. Chapters focus on the design of ecological studies, data management principles, scientific databases, data quality assurance, data documentation, archiving ecological data and information and processing data into information and knowledge. The book stops short of a detailed treatment of data analysis, but does provide pointers to the relevant literature in graphics, statistics and knowledge discovery. The central thesis of the book is that high quality data management systems are critical for addressing future environmental challenges. This requires a new approach to how we conduct ecological research, that views data as a resource and promotes stewardship, recycling and sharing of data. Ecological Data will be particularly useful to those ecologists and information specialists that actively design, manage and analyze environmental databases. However, it will also benefit a wider audience of scientists and students in the ecological and environmental sciences.

Multivariate Analysis of Ecological Data

Multivariate Analysis of Ecological Data
Author: Michael Greenacre
Publisher: Fundacion BBVA
Total Pages: 336
Release: 2014-01-09
Genre: Ecology
ISBN: 8492937505

La diversidad biológica es fruto de la interacción entre numerosas especies, ya sean marinas, vegetales o animales, a la par que de los muchos factores limitantes que caracterizan el medio que habitan. El análisis multivariante utiliza las relaciones entre diferentes variables para ordenar los objetos de estudio según sus propiedades colectivas y luego clasificarlos; es decir, agrupar especies o ecosistemas en distintas clases compuestas cada una por entidades con propiedades parecidas. El fin último es relacionar la variabilidad biológica observada con las correspondientes características medioambientales. Multivariate Analysis of Ecological Data explica de manera completa y estructurada cómo analizar e interpretar los datos ecológicos observados sobre múltiples variables, tanto biológicos como medioambientales. Tras una introducción general a los datos ecológicos multivariantes y la metodología estadística, se abordan en capítulos específicos, métodos como aglomeración (clustering), regresión, biplots, escalado multidimensional, análisis de correspondencias (simple y canónico) y análisis log-ratio, con atención también a sus problemas de modelado y aspectos inferenciales. El libro plantea una serie de aplicaciones a datos reales derivados de investigaciones ecológicas, además de dos casos detallados que llevan al lector a apreciar los retos de análisis, interpretación y comunicación inherentes a los estudios a gran escala y los diseños complejos.

Statistics for Ecologists Using R and Excel

Statistics for Ecologists Using R and Excel
Author: Mark Gardener
Publisher: Pelagic Publishing Ltd
Total Pages: 503
Release: 2017-01-16
Genre: Science
ISBN: 1784271411

This is a book about the scientific process and how you apply it to data in ecology. You will learn how to plan for data collection, how to assemble data, how to analyze data and finally how to present the results. The book uses Microsoft Excel and the powerful Open Source R program to carry out data handling as well as producing graphs. Statistical approaches covered include: data exploration; tests for difference – t-test and U-test; correlation – Spearman’s rank test and Pearson product-moment; association including Chi-squared tests and goodness of fit; multivariate testing using analysis of variance (ANOVA) and Kruskal–Wallis test; and multiple regression. Key skills taught in this book include: how to plan ecological projects; how to record and assemble your data; how to use R and Excel for data analysis and graphs; how to carry out a wide range of statistical analyses including analysis of variance and regression; how to create professional looking graphs; and how to present your results. New in this edition: a completely revised chapter on graphics including graph types and their uses, Excel Chart Tools, R graphics commands and producing different chart types in Excel and in R; an expanded range of support material online, including; example data, exercises and additional notes & explanations; a new chapter on basic community statistics, biodiversity and similarity; chapter summaries and end-of-chapter exercises. Praise for the first edition: This book is a superb way in for all those looking at how to design investigations and collect data to support their findings. – Sue Townsend, Biodiversity Learning Manager, Field Studies Council [M]akes it easy for the reader to synthesise R and Excel and there is extra help and sample data available on the free companion webpage if needed. I recommended this text to the university library as well as to colleagues at my student workshops on R. Although I initially bought this book when I wanted to discover R I actually also learned new techniques for data manipulation and management in Excel – Mark Edwards, EcoBlogging A must for anyone getting to grips with data analysis using R and excel. – Amazon 5-star review It has been very easy to follow and will be perfect for anyone. – Amazon 5-star review A solid introduction to working with Excel and R. The writing is clear and informative, the book provides plenty of examples and figures so that each string of code in R or step in Excel is understood by the reader. – Goodreads, 4-star review

Bayesian Data Analysis in Ecology Using Linear Models with R, BUGS, and Stan

Bayesian Data Analysis in Ecology Using Linear Models with R, BUGS, and Stan
Author: Franzi Korner-Nievergelt
Publisher: Academic Press
Total Pages: 329
Release: 2015-04-04
Genre: Science
ISBN: 0128016787

Bayesian Data Analysis in Ecology Using Linear Models with R, BUGS, and STAN examines the Bayesian and frequentist methods of conducting data analyses. The book provides the theoretical background in an easy-to-understand approach, encouraging readers to examine the processes that generated their data. Including discussions of model selection, model checking, and multi-model inference, the book also uses effect plots that allow a natural interpretation of data. Bayesian Data Analysis in Ecology Using Linear Models with R, BUGS, and STAN introduces Bayesian software, using R for the simple modes, and flexible Bayesian software (BUGS and Stan) for the more complicated ones. Guiding the ready from easy toward more complex (real) data analyses ina step-by-step manner, the book presents problems and solutions—including all R codes—that are most often applicable to other data and questions, making it an invaluable resource for analyzing a variety of data types. - Introduces Bayesian data analysis, allowing users to obtain uncertainty measurements easily for any derived parameter of interest - Written in a step-by-step approach that allows for eased understanding by non-statisticians - Includes a companion website containing R-code to help users conduct Bayesian data analyses on their own data - All example data as well as additional functions are provided in the R-package blmeco

Mixed Effects Models and Extensions in Ecology with R

Mixed Effects Models and Extensions in Ecology with R
Author: Alain Zuur
Publisher: Springer Science & Business Media
Total Pages: 579
Release: 2009-03-05
Genre: Science
ISBN: 0387874585

This book discusses advanced statistical methods that can be used to analyse ecological data. Most environmental collected data are measured repeatedly over time, or space and this requires the use of GLMM or GAMM methods. The book starts by revising regression, additive modelling, GAM and GLM, and then discusses dealing with spatial or temporal dependencies and nested data.

Ecological Models and Data in R

Ecological Models and Data in R
Author: Benjamin M. Bolker
Publisher: Princeton University Press
Total Pages: 408
Release: 2008-07-21
Genre: Computers
ISBN: 0691125228

Introduction and background; Exploratory data analysis and graphics; Deterministic functions for ecological modeling; Probability and stochastic distributions for ecological modeling; Stochatsic simulation and power analysis; Likelihood and all that; Optimization and all that; Likelihood examples; Standar statistics revisited; Modeling variance; Dynamic models.

Design and Analysis of Long-term Ecological Monitoring Studies

Design and Analysis of Long-term Ecological Monitoring Studies
Author: Robert A. Gitzen
Publisher: Cambridge University Press
Total Pages: 779
Release: 2012-06-07
Genre: Nature
ISBN: 1139510193

To provide useful and meaningful information, long-term ecological programs need to implement solid and efficient statistical approaches for collecting and analyzing data. This volume provides rigorous guidance on quantitative issues in monitoring, with contributions from world experts in the field. These experts have extensive experience in teaching fundamental and advanced ideas and methods to natural resource managers, scientists and students. The chapters present a range of tools and approaches, including detailed coverage of variance component estimation and quantitative selection among alternative designs; spatially balanced sampling; sampling strategies integrating design- and model-based approaches; and advanced analytical approaches such as hierarchical and structural equation modelling. Making these tools more accessible to ecologists and other monitoring practitioners across numerous disciplines, this is a valuable resource for any professional whose work deals with ecological monitoring. Supplementary example software code is available online at www.cambridge.org/9780521191548.

Environmental Data Analysis with MatLab

Environmental Data Analysis with MatLab
Author: William Menke
Publisher: Elsevier
Total Pages: 282
Release: 2011-09-02
Genre: Computers
ISBN: 0123918863

"Environmental Data Analysis with MatLab" is for students and researchers working to analyze real data sets in the environmental sciences. One only has to consider the global warming debate to realize how critically important it is to be able to derive clear conclusions from often-noisy data drawn from a broad range of sources. This book teaches the basics of the underlying theory of data analysis, and then reinforces that knowledge with carefully chosen, realistic scenarios. MatLab, a commercial data processing environment, is used in these scenarios; significant content is devoted to teaching how it can be effectively used in an environmental data analysis setting. The book, though written in a self-contained way, is supplemented with data sets and MatLab scripts that can be used as a data analysis tutorial. It is well written and outlines a clear learning path for researchers and students. It uses real world environmental examples and case studies. It has MatLab software for application in a readily-available software environment. Homework problems help user follow up upon case studies with homework that expands them.