Cereal Genomics II

Cereal Genomics II
Author: Pushpendra K. Gupta
Publisher: Springer Science & Business Media
Total Pages: 440
Release: 2013-05-29
Genre: Technology & Engineering
ISBN: 9400764014

“Cereal Genomics” published in 2004 served the purpose of collecting all information on cereal genomics at one place and was well received by the cereal workers through-out the world. The last eight years have witnessed significant advancement in the field of cereal genomics. For instance, high-density genetic maps, physical maps, QTL maps and even draft genome sequence have become available for several cereal species. Furthermore, the next generation sequencing (NGS) technologies have revolutionized genomics research, so that it is possible now to sequence genomes of hundreds or thousands of accessions of an individual cereal crop. Significant amounts of data generated using these NGS technologies created a demand for computational tools to analyse this massive data. In view of these developments, the Editors realised that there was a need to have an updated volume on the present status and future prospects of cereal genomics. These developments related to technology and the tools have been documented in this volume, thus supplementing our earlier edited volume “Cereal Genomics”. “Cereal Genomics II” discusses advances in cereal genomics research made during the last eight years, and presents state-of-art cereal genomics and its utilization involving both basic research such as comparative genomics and functional genomics, and applied research like QTL mapping and molecular breeding.

Cereal Genomics

Cereal Genomics
Author: Robert J. Henry
Publisher: Humana
Total Pages: 0
Release: 2013-11-16
Genre: Science
ISBN: 9781627037143

​In Cereal Genomics: Methods and Protocols, expert researchers provides modern protocols for the analysis and manipulation of cereal genomes. Techniques for isolation and analysis of DNA and RNA from both the vegetative tissues and from the more challenging seeds of cereals are described. Tools for the isolation, characterization and functional analysis of cereal genes and their transcripts are detailed. Methods for molecular screening of cereals and for their genetic transformation are also covered. Written in the highly successful Methods in Molecular Biology series format, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and tips on troubleshooting and avoiding known pitfalls. Authoritative and practical, Cereal Genomics: Methods and Protocols provides a comprehensive resource for those studying cereal genomes.

Genetic and Genomic Resources for Grain Cereals Improvement

Genetic and Genomic Resources for Grain Cereals Improvement
Author: Mohar Singh
Publisher: Academic Press
Total Pages: 386
Release: 2015-11-10
Genre: Business & Economics
ISBN: 0128020377

Genetic and Genomic Resources For Cereals Improvement is the first book to bring together the latest available genetic resources and genomics to facilitate the identification of specific germplasm, trait mapping, and allele mining that are needed to more effectively develop biotic and abiotic-stress-resistant grains. As grain cereals, including rice, wheat, maize, barley, sorghum, and millets constitute the bulk of global diets, both of vegetarian and non-vegetarian, there is a greater need for further genetic improvement, breeding, and plant genetic resources to secure the future food supply. This book is an invaluable resource for researchers, crop biologists, and students working with crop development and the changes in environmental climate that have had significant impact on crop production. It includes the latest information on tactics that ensure that environmentally robust genes and crops resilient to climate change are identified and preserved. - Provides a single-volume resource on the global research work on grain cereals genetics and genomics - Presents information for effectively managing and utilizing the genetic resources of this core food supply source - Includes coverage of rice, wheat, maize, barley, sorghum, and pearl, finger and foxtail millets

Genomic Designing for Abiotic Stress Resistant Cereal Crops

Genomic Designing for Abiotic Stress Resistant Cereal Crops
Author: Chittaranjan Kole
Publisher: Springer Nature
Total Pages: 332
Release: 2021-08-31
Genre: Science
ISBN: 3030758753

This book presents abiotic stresses that cause crop damage in the range of 6-20%. Understanding the interaction of crop plants to the abiotic stresses caused by heat, cold, drought, flooding, submergence, salinity, acidity, etc., is important to develop resistant crop varieties. Knowledge on the advanced genetic and genomic crop improvement strategies including molecular breeding, transgenics, genomic-assisted breeding, and the recently emerging genome editing for developing resistant varieties in cereal crops is imperative for addressing FPNEE (food, health, nutrition, energy, and environment) security. Whole genome sequencing of these crops followed by genotyping-by-sequencing has facilitated precise information about the genes conferring resistance useful for gene discovery, allele mining, and shuttle breeding which in turn opened up the scope for 'designing' crop genomes with resistance to abiotic stresses. The nine chapters each dedicated to a cereal crop in this volume are deliberate on different types of abiotic stresses and their effects on and interaction with crop plants; enumerate on the available genetic diversity with regard to abiotic stress resistance among available cultivars; illuminate on the potential gene pools for utilization in interspecific gene transfer; are brief on the classical genetics of stress resistance and traditional breeding for transferring them to their cultivated counterparts; elucidate on the success stories of genetic engineering for developing abiotic stress-resistant crop varieties; discuss on molecular mapping of genes and QTLs underlying stress resistance and their marker-assisted introgression into elite varieties; enunciate on different emerging genomics-aided techniques including genomic selection, allele mining, gene discovery, and gene pyramiding for developing adaptive crop varieties with higher quantity and quality, and also elaborate some case studies on genome editing focusing on specific genes for generating abiotic stress-resistant crops.

Cereal Genomics

Cereal Genomics
Author: Pushpendra K. Gupta
Publisher: Springer Science & Business Media
Total Pages: 639
Release: 2006-01-19
Genre: Technology & Engineering
ISBN: 1402023596

Cereals make an important component of daily diet of a major section of human population, so that their survival mainly depends on the cereal grain production, which should match the burgeoning human population. Due to painstaking efforts of plant breeders and geneticists, at the global level, cereal production in the past witnessed a steady growth. However, the cereal production in the past has been achieved through the use of high yielding varieties, which have a heavy demand of inputs in the form of chemical fertilizers, herbicides and insecticides/pesticides, leading to environmental degradation. In view of this, while increasing cereal production, one also needs to keep in mind that agronomic practices used for realizing high productivity do not adversely affect the environment. Improvement in cereal production in the past was also achieved through the use of alien genetic variation available in the wild relatives of these cereals, so that conservation and sustainable use of genetic resources is another important area, which is currently receiving the attention of plant breeders. The work leading to increased cereal production in the past received strong support from basic research on understanding the cereal genomes, which need to be manipulated to yield more from low inputs without any adverse effects as above. Through these basic studies, it also became fairly apparent that the genomes of all cereals are related and were derived from the same lineage, million of years ago.

Genomics Assisted Breeding of Crops for Abiotic Stress Tolerance, Vol. II

Genomics Assisted Breeding of Crops for Abiotic Stress Tolerance, Vol. II
Author: Vijay Rani Rajpal
Publisher: Springer
Total Pages: 270
Release: 2019-07-01
Genre: Science
ISBN: 3319995731

The abiotic stresses like drought, temperature, cold, salinity, heavy metals etc. affect a great deal on the yield performance of the agricultural crops. To cope up with these challenges, plant breeding programs world-wide are focussing on the development of stress tolerant varieties in all crop species. Significant genomic advances have been made for abiotic stress tolerance in various crop species in terms of availability of molecular markers, QTL mapping, genome-wide association studies (GWAS), genomic selection (GS) strategies, and transcriptome profiling. The broad-range of articles involving genomics and breeding approaches deepens our existing knowledge about complex traits. The chapters are written by authorities in their respective fields. This book provides comprehensive and consolidated account on the applications of the most recent findings and the progress made in genomics assisted breeding for tolerance to abiotic stresses in many important major crop species with a focus on applications of modern strategies for sustainable agriculture. The book is especially intended for students, molecular breeders and scientists working on the genomics-assisted genetic improvement of crop species for abiotic stress tolerance.

Genetic Resources, Chromosome Engineering, and Crop Improvement

Genetic Resources, Chromosome Engineering, and Crop Improvement
Author: Ram J. Singh
Publisher: CRC Press
Total Pages: 457
Release: 2006-01-13
Genre: Science
ISBN: 0203489268

Summarizing landmark research, Volume 2 of this essential series furnishes information on the availability of germplasm resources that breeders can exploit for producing high-yielding cereal crop varieties. Written by leading international experts, this volume offers the most comprehensive and up-to-date information on employing genetic resources t

Genomic Designing for Biotic Stress Resistant Cereal Crops

Genomic Designing for Biotic Stress Resistant Cereal Crops
Author: Chittaranjan Kole
Publisher: Springer Nature
Total Pages: 340
Release: 2021-08-31
Genre: Science
ISBN: 3030758796

This book presents deliberations on molecular and genomic mechanisms underlying the interactions of crop plants to the biotic stresses caused by different diseases and pests that are important to develop resistant crop varieties. Knowledge on the advanced genetic and genomic crop improvement strategies including molecular breeding, transgenics, genomic-assisted breeding, and the recently emerging genome editing for developing resistant varieties in cereal crops is imperative for addressing FHNEE (food, health, nutrition, energy, and environment) security. Whole genome sequencing of these crops followed by genotyping-by-sequencing has provided precise information regarding the genes conferring resistance useful for gene discovery, allele mining, and shuttle breeding which in turn opened up the scope for 'designing' crop genomes with resistance to biotic stresses. The eight chapters each dedicated to a cereal crop in this volume elucidate on different types of biotic stresses and their effects on and interaction with the crop; enumerate on the available genetic diversity with regard to biotic stress resistance among available cultivars; illuminate on the potential gene pools for utilization in interspecific gene transfer; present brief on classical genetics of stress resistance and traditional breeding for transferring them to their cultivated counterparts; depict the success stories of genetic engineering for developing biotic stress-resistant crop varieties; discuss on molecular mapping of genes and QTLs underlying stress resistance and their marker-assisted introgression into elite varieties; enunciate on different genomics-aided techniques including genomic selection, allele mining, gene discovery, and gene pyramiding for developing adaptive crop varieties with higher quantity and quality of yields, and also elaborate some case studies on genome editing focusing on specific genes for generating biotic stress-resistant crops.

Omics Approach to Manage Abiotic Stress in Cereals

Omics Approach to Manage Abiotic Stress in Cereals
Author: Aryadeep Roychoudhury
Publisher: Springer Nature
Total Pages: 610
Release: 2022-05-30
Genre: Science
ISBN: 9811901406

The edited book highlights various emerging Omics tools and techniques that are currently being used in the analysis of responses to different abiotic stress in agronomically important cereals and their applications in enhancing tolerance mechanism. Plants are severely challenged by diverse abiotic stress factors such as low water availability (drought), excess water (flooding/ waterlogging), extremes of temperatures (cold, chilling, frost, and heat), salinity, mineral deficiency, and heavy metal toxicity. Agronomically important cereal crops like Rice, Wheat, Maize, Sorghum, Pearl Millet, Barley, Oats, Rye, Foxtail Millets etc. that are the major sources of food material and nutritional components for human health are mostly exposed to abiotic stresses during the critical phases of flowering and grain yield. Different Omics platforms like genomics, transcriptomics proteomics, metabolomics and phenomics, in conjunction with breeding and transgenic technology, and high throughput technologies like next generation sequencing, epigenomics, genome editing and CRISPR-Cas technology have emerged altogether in understanding abiotic stress response and strengthening defense and tolerance mechanism of different cereals. This book is beneficial to different universities and research institutes working with different cereal crops in the areas of stress physiology, stress-associated genes and proteins, genomics, proteomics, genetic engineering, and other fields of molecular plant physiology. The book can also be used as advanced textbook for the course work of research and master’s level students. It will be of use to people involved in ecological studies and sustainable agriculture. The proposed book bring together the global leaders working on environmental stress in different cereal crops and motivate scientists to explore new horizons in the relevant areas of research.